Topic > Gene environment interaction

Table of contents and setting models phenotypic variation ) the behavior evokes an environmental response. For example, the association between marital conflict and depression may reflect strains that arise when interacting with a depressed spouse rather than a causal effect of marital conflict on depression risk. Active gene-environment correlation occurs when an individual has an inherited inclination to select for environmental exposure. For example, typically extroverted individuals may seek very different social environments than those who are shy and withdrawn. Quantitative genetic studies Twin and adoption studies have provided much of the evidence for gene-environment correlations, demonstrating that putative environmental measures are heritable. For example, studies of adult twins have shown that desirable and undesirable life events are moderately heritable, as are specific life events and circumstances, including divorce, marriage propensity, marital quality, and social support. Studies in which researchers measured child-specific environmental aspects have also shown that putative environmental factors, such as parental discipline or warmth, are moderately heritable. Television viewing, peer group orientations, and social attitudes have been shown to be moderately heritable. There is also a growing literature on genetic factors that influence behaviors that pose a health risk, such as alcohol, tobacco and illegal drug use, and risky behaviors. Like parental discipline, these health behaviors are genetically influenced, but are thought to have environmentally mediated effects on disease. To the extent that researchers have attempted to determine why genes and environments are related, most of the evidence has emphasized the intervening effects of personality and behavioral characteristics. Environments are heritable because the genotype influences the behaviors that evoke, select and modify the characteristics of the environment. . Therefore, environments less susceptible to behavioral modification tend to be less heritable. Molecular genetic studies Evidence of the existence of gene-environment correlations has recently begun to accumulate through molecular genetic investigations. The Collaborative Studies on Genetics of Alcoholism group reported that a single nucleotide polymorphism in intron 7 of the gamma-aminobutyric acid receptor A a2 was associated with alcohol dependence and marital status. Individuals who had the high-risk GABRA2 variant were less likely to marry, in part because they were at higher risk for antisocial personality disorder and were less likely to be motivated by a desire to please others. There is also molecular evidence of passive gene-environment correlation. A recent study found that children were nearly 2.5 times more likely to be diagnosed with attention deficit hyperactivity disorder (ADHD) if their mothers were divorced, separated, or never married. In this sample, however, mothers who possessed the short allele of the DRD2 dopamine receptor gene were more likely to be divorced, separated, or never married. Additionally, their children were more likely to have ADHD. Therefore, part of the association between parental marital status and ADHD diagnosis among children in this sample is due toDRD2 maternal genotype confounding variable. Both of these studies also found evidence of gene-environment interaction. ImportanceScientists want to know whether exposure to environmental risk causes disease. The fact that environmental exposures are hereditary means that the relationship between environmental exposures and disease can be confounded by genotype. That is, the relationship could be spurious because the same genetic factors could influence both exposure to environmental risk and disease. In such cases, measures to reduce environmental exposure will not reduce the risk of the disease. On the other hand, heritability of exposure to environmental conditions itself does not mean that environmental factors are not responsible for disease and therefore reducing exposure would benefit individuals with a genetic predisposition to risk behavior. Evocative gene-environment correlation occurs when an individual's behavior (heredity) behavior evokes an environmental response. For example, the association between marital conflict and depression may reflect strains that arise when interacting with a depressed spouse rather than a causal effect of marital conflict on depression risk. Active gene-environment correlation occurs when an individual has an inherited inclination to select for environmental exposure. For example, typically extroverted individuals may seek very different social environments than those who are shy and withdrawn. Quantitative genetic studies Twin and adoption studies have provided much of the evidence for gene-environment correlations, demonstrating that putative environmental measures are heritable. For example, studies of adult twins have shown that desirable and undesirable life events are moderately heritable, as are specific life events and circumstances, including divorce, marriage propensity, marital quality, and social support. Studies in which researchers measured child-specific environmental aspects have also shown that putative environmental factors, such as parental discipline or warmth, are moderately heritable. Television viewing, peer group orientations, and social attitudes have been shown to be moderately heritable. There is also a growing literature on genetic factors that influence behaviors that pose a health risk, such as alcohol, tobacco and illegal drug use, and risky behaviors. Like parental discipline, these health behaviors are genetically influenced, but are thought to have environmentally mediated effects on disease. To the extent that researchers have attempted to determine why genes and environments are related, most of the evidence has emphasized the intervening effects of personality and behavioral characteristics. Environments are heritable because the genotype influences the behaviors that evoke, select and modify the characteristics of the environment. . Therefore, environments less susceptible to behavioral modification tend to be less heritable. Molecular genetic studies Evidence of the existence of gene-environment correlations has recently begun to accumulate through molecular genetic investigations. The Collaborative Studies on Genetics of Alcoholism group reported that a single nucleotide polymorphism in intron 7 of the gamma-aminobutyric acid receptor A a2 was associated with alcohol dependence and marital status. Individuals who had the high-risk GABRA2 variant were less likely to marry, in part because they were at higher risk for antisocial personality disorder and were less likely tobeing motivated by the desire to please others. There is also molecular evidence of passive gene-environment correlation. A recent study found that children were nearly 2.5 times more likely to be diagnosed with attention deficit hyperactivity disorder (ADHD) if their mothers were divorced, separated, or never married. In this sample, however, mothers who possessed the short allele of the DRD2 dopamine receptor gene were more likely to be divorced, separated, or never married. Additionally, their children were more likely to have ADHD. Therefore, part of the association between parental marital status and ADHD diagnosis among children in this sample is due to the confounding variable of DRD2 maternal genotype. Both of these studies also found evidence of gene-environment interaction. ImportanceScientists want to know whether exposure to environmental risk causes disease. The fact that environmental exposures are heritable means that the relationship between environmental exposures and disease can be confounded by genotype. That is, the relationship could be spurious because the same genetic factors could influence both exposure to environmental risk and disease. In such cases, measures to reduce environmental exposure will not reduce the risk of the disease. On the other hand, heritability of exposure to environmental conditions itself does not mean that environmental factors are not responsible for disease and therefore reducing exposure would benefit individuals with a genetic predisposition to risk behavior. Genetic studies active quantitativeMolecular genetic studiesMeaning Gene-environment interaction occurs when two different genotypes respond to environmental variation in different ways. A reaction norm is a graph that shows the relationship between genes and environmental factors when phenotypic differences are continuous. They can help illustrate GxE interactions. When the reaction norm is not parallel, as shown in the following figure, a gene-environment interaction exists. This indicates that each genotype responds to environmental variation differently. Environmental variation can be physical, chemical, biological, behavior patterns, or life events. Say no to plagiarism. Get a tailor-made essay on "Why Violent Video Games Shouldn't Be Banned"? Get an original essay Genetic Environment Interaction, this graph indicating lines that are not parallel, so there is gene by environment interaction. Genotype x Environment (G x E) Interaction Implications and Patterns Although the environment has always been in a state of change, concerns regarding the pace of change have become primary topics of study for ecologists. The ability, or inability, of organisms to adapt to these changes at the necessary speed determines the continuation, extinction or evolution of species. Genotype-by-environment interaction (gxe) can be defined as the differential response of different genotypes to changes in the environment. When populations are not confined to an area, individuals must have the genetic makeup to survive in the environment in which they live. This may require a slight difference in the size of insect wings or the ability to produce various defense compounds in plants between environments. . Likewise, plant and animal breeders have used gxe interaction to obtain the highest quality products that will earn maximum profit. The purpose of this article is to provide a basic understanding of gxe interactions in terms of potential causes, mathematical models, and practical applications. Genotypic and Phenotypic Variation Variation between species results from one of two phenomena, genotypic or phenotypic variation.Genotypes are assumed by observing differential effects on their expression. This implies that the most popular method for determining gxe interaction is to study the resulting phenotypes under the influence of the environment. However, Johannsen suggests that because variation in a trait can arise from variation in genotype or environment, heritable and non-heritable trait variation cannot be determined by examining phenotypes alone. It is important to know an organism's environment and its genetic history. Common environmental factors in gxe studies include temperature, light intensity, and humidity. Distinguishing genotypic from phenotypic variation is often difficult. Genotypic variation originates from differences in the genomes of different individuals. Results of directional selection, which changes genetic frequencies to lead to the evolution of a species. The second phenotypic variation occurs when individuals are exposed to different environmental parameters while developing similar genomes. In phenotypic variation, individuals adapt in response to specific environmental changes. Acclimation, for some organisms, can occur multiple times without changing the genetic nature of an individual. Implications G x E The interaction between genotype and environment has serious implications on the evolution of species. Lande and Shannon (1996) suggest that in constant or unpredictable environments, genetic variance reduces the average fitness of the population and increases the risk of extinction. The rate of evolution of the average phenotype in response to selection is proportional to the product of additive genetic variance in the trait and the intensity of directional selection. In the short term, genetic variability is often less critical than other determinants of population persistence, but over time it can play a decisive role in allowing a population to persist and adapt to a changing environment. Today, conservation efforts have focused on genetic events in small populations. However, long-term conservation of biodiversity requires understanding not only the demography and genetics of small populations, but also the ecology and evolution of abundant species. Environmental Stress Resistance to stress occurs primarily at the individual level and involves physiological or behavioral tolerance or adaptability. The subsequent response to increased stress may result in the survival of only the best adapted individuals of the species. Replacements can occur between genera or families once species have experienced and responded to environmental stress (Barrett 1981). In variable environments, heterogeneous species in less diverse communities should be more resistant to stress induced by variable environments. Fisher (1977, in Barrett 1981) explains that organisms that have adapted to endure unstable environments are more likely to tolerate independent stress than those organisms that have adapted only to stable environments. At the population level, resistance to environmental stress is strengthened by polymorphism. Polymorphism increases the probability that more tolerant individuals will survive and evolve through combinations of genes present in the population. Population resistance is increased by polymorphism because it can result in short-term selection of more tolerant genotypes in stressful environments. Molecular events Haploid species can be highly polymorphic, sexual reproduction and diploidy are not requirements for the maintenance of genetic variation in natural populations. It is not known which, but several selection mechanisms have been questioned in their ability to protect alleles at loci. The interactions Gx and must be extended if selection favors different alleles in different environments. However, gxe occurrences do not guarantee changes in fitness rankings that would protect polymorphisms. Gxe interaction studies at single loci are rare. However, Dean (1995) attempted to provide an understanding of how events at the molecular level give rise to gxe interaction in fitness. His study will be used as an illustration of the topic. Using natural and laboratory lactose operon mutants of Escherichia coli, Dean's experiment targeted the effects of environmental variation on genetic variation. The environmental variation, in this case, was generated by five different galactosides, which are the nutrient that limits growth rates during the competition experiments. One-way ANOVA showed a significant difference in fitness between operon strains within each environment. Using a linear additive model, Dean found that changes in fitness across environments were due to gxe interactions. Using his experimentally verified model for lactose metabolism, a description of fitness in terms of molecular events was possible. For example, strain DD320, which was unable to metabolize any of the galactosides, also had a fitness of 0. This indicates that changes in fitness, which are generated by changes in the distribution of metabolic control, are a potential source of gxe interactions. Experimental Design Studying gxe interactions has proven difficult. Experimental design among researchers has varied due to individual perceptions of how factors should be manipulated. However, ongoing studies are leading to appropriate strategies for carrying out such studies. Phenylketonuria (PKU) is a metabolic disease in which a rare gene causes a mental handicap when phenylalanine is present in the diet. The G x e interaction became the mechanism of study for this disease when it was discovered that placing children with the genetic defect on a special diet prevented the effects of the disease. Van den Oord produced gxe studies of PKU on individuals using tests with and without parents as controls. This decision was made because a genetic marker is not related to the PKU gene. Van den Oord pointed out that by mixing within the population's parental mating type groups, there can be no preferential transmission of one allele or differences in means. However, he noted that population mixing between parental mating types can influence differences in allele frequencies or means. Mathematical Models Interaction Using the simplest model, a 2 x 2 fully factorial design, evaluation of the effects of genotype, environment, and interaction on the organism's phenotype are provided (Mather and Jones 1958). When two genotypes occur, there is the possibility of four phenotypes, P11, P12, P22, P21.Genotype12MeanEnvironment1P11 = g + e + geP21 = g = e -gee2P12 = g - e - geP22 = g - e + ge -e Mean g -gg = P11 - P12-g = P21 - P22e = P11 - P21-e = P12 - P22ge = P11 - P22-ge = P12 - P21 Background Genotypes The interaction G xe (g) represents the differential response of the genotypes in variable environments; e is the sum or average of g; b represents the regression coefficient (Mather and Caligari 1976). This model focuses on the regression coefficient (b) of the genotype's response to a series of changes (g) and the overall effect of the environment (e) in relation to the background genotypes. Mather and Caligari (1976) confirm that differences in b depend on the underlying genotypes and that heterogeneity is attributable to gene interaction. exw + exs + 2eB)-exw + exs + 2eB)0Difference2dx - (exw - exs)2dx + (exw - exs) 2dxS.S. Sum (exw + exs + 2eB)2S.S. Diff. (exw - exs)2S.CP (exw - exs)(exw + exs + 2eB) b (exw - exs) / (exw + exs + 2eB)Background -WW -WS -SW -SS eB(e2w + e3w )( e2w + e3s)(e2w + e3w)(e2w + e3s)Studies/Applications Referring to Mather and Caligari (1976), the experimental significance will now be discussed. Mather and Caligari involved eight true breeding lines of the inbred Wellington and Samarkand strains, all under the influence of different temperatures. They were able to confirm their hypothesis that the value of b depends on the underlying genotype. They also found that, with respect to offspring yield, some background genotypes responded to environmental changes in the opposite direction than others. The intent of the study was to produce and confirm the previously stated mathematical model. This study was not only important because of its gxe significance, but also because it used an animal population and a model organism. Another animal study focused on commercial production, a major contributor to gxe studies. Here environmental and genotype investigations on lean growth, health status and pork quality took place. This study is important for pork producers so that breeding programs, diets, and management practices can be implemented for optimal pork production. Results included that the environment has a significant effect on market weight rate, kill loss, carcass and pork quality, and pork pH. In plants, gxe studies are also important in cultivated populations. Tolerance to ultraviolet B radiation in plants has become a very popular topic among scientists in recent years. Arabidopsis thaliana ecotypes were exposed to various levels of UV-B. It was found that ecotypes from higher altitudes had a higher tolerance for UV-B rays than those collected from lower altitudes. Tolerance was measured by observing morphological characters such as plant height, number of shoots, number of branches, rosette diameter, vegetative mass and reproductive mass. Thanks to these results, Arabidopsis thaliana can be used as an indicator species of UV-B radiation levels. If plants at lower altitudes begin to die or migrate to even lower altitudes, they can serve as a warning of increased UV-B rays. In a similar study, five semiarid forage oat varieties were tested in ten environments. Soils remained constant while precipitation varied as an environmental factor. Late varieties were found to have higher dry matter and lower crude protein content, and forage produced under lower rainfall conditions tended to have more dry matter and crude protein. Studies similar to these can lead to the selection of specific environmentally tolerant plants and animals in agriculture and conservation. GENETIC ENVIRONMENT CORRELATION Gene-environment correlation (or genotype-environment correlation) is said to occur when exposure to environmental conditions depends on an individual's genotype. Gene -environmental correlations are a correlation between two traits, for example height and weight, which would mean that when one changes, the other also changes. Gene-environment correlations can arise from both causal and non-causal mechanisms. Genetic variants influence environmental exposure indirectly through behavior. Three causal mechanisms that give rise to gene-environment correlations have been described.3. PassivePassive gene-environment correlation refers to the association between the genotype that a child inherits.